The affected families can contact on the number and urgent measures will be taken by Sharjah Social Services Department to help them
Japanese media said all seven of the sailors who had been reported missing were found dead.
"Divers were able to access the space and found a number of bodies," the Seventh Fleet said in a statement.
It said in an earlier statement the sailors were being transferred to a US naval hospital where they would be identified.
"The families are being notified and being provided the support they need during this difficult time," the Seventh Fleet said.
The Fitzgerald, an Aegis guided missile destroyer, collided with the Philippine-flagged merchant vessel more than three times its size some 56 nautical miles southwest of Yokosuka early on Saturday.
Three people were medically evacuated to the US Naval Hospital in Yokosuka after the collision, including the ship's commanding officer, Commander Bryce Benson, who was reported to be in stable condition, the Navy said.
The other two were being treated for lacerations and bruises.
The USS Fitzgerald sailed into port on Saturday evening, listing around 5 degrees, a US Navy spokesman in Yokosuka said. The flooding was in two berthing compartments, the radio room and auxiliary machine room.
The bodies were found in the berthing compartments, the navy spokesman said, suggesting they could have been asleep at time of collision. There were 285 crew onboard.
Benson took command of the Fitzgerald on May 13. He had previously commanded a minesweeper based in Sasebo in western Japan.
It was unclear how the collision happened. "Once an investigation is complete then any legal issues can be addressed," a spokesman for the US 7th Fleet said.
Japanese authorities were looking into the possibility of "endangerment of traffic caused by professional negligence", Japanese media reported, but it was not clear whether that might apply to either or both of the vessels.
The US Navy said the collision happened at about 2:30am. local time (1730 GMT Friday), while the Japanese Coast Guard said it was 1:30am local time.
The Fitzgerald suffered damage on her starboard side above and below the waterline, causing "significant damage", the US Navy said on Saturday.
Japan's Nippon Yusen KK, which charters the container ship, ASX Crystal, said in a statement on Saturday it would "cooperate fully" with the Coast Guard's investigation of the incident.
At around 29,000 tons displacement, the ship dwarfs the 8,315-ton US warship. It was carrying 1,080 containers from the port of Nagoya to Tokyo.
None of the 20 crew members aboard the container ship, all Filipino, were injured, and the ship was not leaking oil, Nippon Yusen said. The ship arrived at Tokyo Bay later on Saturday.
The waterways approaching Tokyo Bay are busy with commercial vessels sailing to and from Japanâ?Ts two biggest container ports in Tokyo and Yokohama.
(Reporting by Tim Kelly and Linda Sieg; Editing by Bill Tarrant)
The affected families can contact on the number and urgent measures will be taken by Sharjah Social Services Department to help them
It is likely to be humid by night with possibility of fog or mist formation over some internal and coastal areas
For the first time in EMEA, digital channels account for more fraud losses than physical channels
The resident received the Abu Dhabi Award personally from President Sheikh Mohamed for her heroic action on April 19
Most of them are getting help from friends who live nearby while others opt to grab a meal at eateries so they could also charge their phones
Doctors report 20% rise in cases of fever, cold and cough after rains leave some areas flooded
Residents of some areas are struggling to return to their normal lives as streets are still flooded even six days after the rains
Medium-pace bowler Sandeep Sharma took 5-18 to help restrict Mumbai to 179-9